In this section

Statistics on protein trees

The protein tree pipeline is described at the following page.

This page provides a summary of the Ensembl phylogenetic analysis of protein families. The following views are available:

Gene tree coverage and Gene QC (per species)

Quick links: Agaricales, Atheliales, Blastocladiales, Boletales, Botryosphaeriales, Cantharellales, Chaetothyriomycetidae, Chytridiomycota, Corticiales, Cryptomycota, Culicosporidae, Dacrymycetales, Dothideomycetes, Dothideales, Erysiphales, Eurotiales, Geastrales, Georgefischeriales, Gloeophyllales, Glomerellales, Helotiales, Hymenochaetales, Hypocreales, Jaapiales, Magnaporthales, Microascales, Microbotryales, Microsporidia, Mixiales, Mortierellomycotina, Mucoromycotina, Myxotrichaceae, Nosematidae, Onygenales, Ophiostomatales, Orbiliales, Ordosporidae, Pezizales, Pleistophoridae, Pleosporales, Polyporales, Pucciniales, Rhizophydiales, Russulales, Saccharomycetales, Schizosaccharomycetales, Sclerotiniaceae, Sebacinales, Sordariales, Sordariomycetidae, Sporidiobolales, Taphrinomycotina, Tremellales, Tubulinosematidae, Ustilaginales, Verrucariales, Wallemiales, Xylariales, Fungi

Favourite species

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Saccharomyces cerevisiae S288C6600556410361225442
350000
Schizosaccharomyces pombe 972h-51454912233694843
192000
Aspergillus nidulans FGSC A4105349565969689497
262000
Puccinia graminis f. sp. tritici CRL 75-36-700-315800133362464106912267
3789000
Zymoseptoria tritici IPO3231093196921239639629
169000

Agaricales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Termitomyces sp. J132111431051662713639153
2710000
Agaricus bisporus var. burnettii JB137-S81127110070120117038367
2616000
Coprinopsis cinerea okayama7#1301335511111224414679644
2395000
Cylindrobasidium torrendii FP15055 ss-101392711859206819379922
2920000
Collybiopsis luxurians FD-317 M11459412208238630399169
5213000
Amanita thiersii Skay4041103469339100711278212
1742000
Hypsizygus marmoreus16627133323295175511577
2965000
Schizophyllum commune H4-816173127623411247410288
3670000
Leucoagaricus sp. SymC.cos69848521333452
76000
Fistulina hepatica ATCC 6442893878247114010597188
1896000
Galerina marginata CBS 339.8821388175213867219515326
5351000
Armillaria solidipes2080818664214439018274
1246000
Laccaria amethystina LaAM-08-121020158335187347612357
5259000
Lentinula edodes120511029817538569442
1989000
Armillaria ostoyae2229919585271449419091
2548000
Armillaria gallica25695224613234184220619
4496000
Hebeloma cylindrosporum1537312247312673811509
2217000
Amanita muscaria Koide BX00818086136074479282010787
4775000
Moniliophthora roreri MCA 299717910157302180286212868
5483000
Pleurotus ostreatus PC15122961093613609679969
2278000
Hypholoma sublateritium FD-334 SS-417766140933673171912374
3457000

Atheliales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Athelia psychrophila32847281444703892419220
15111000
Piloderma croceum F 159821515158915624207513816
4549000

Blastocladiales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Allomyces macrogynus ATCC 3832718774166612113562211039
9598000

Boletales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Scleroderma citrinum Foug A20990160074983219913808
6109000
Serpula lacrymans var. lacrymans S7.31448111895258621169779
3376000
Rhizopogon vesiculosus14191121112080155610555
3322000
Pisolithus tinctorius Marx 27022644181024542327314829
7642000
Suillus luteus UH-Slu-Lm8-n118297139914306133312658
3750000
Paxillus involutus ATCC 2001751170010625107516538972
4933000
Hydnomerulius pinastri MD-312791270798335296550
1479000
Pisolithus microcarpus 44120968166374331221614421
6311000
Coniophora puteana RWD-64-598 SS213758121391619161610523
3690000

Botryosphaeriales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Neofusicoccum parvum UCRNP2103669696670179679
153000
Macrophomina phaseolina MS61380611279252718011099
526000

Cantharellales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Rhizoctonia solani AG-1 IA10489645140386485803
1026000
Botryobasidium botryosum FD-172 SS116501132713230281110460
4911000
Tulasnella calospora MUT 418219545154004145476410636
7235000

Chaetothyriomycetidae

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Exophiala aquamarina CBS 11991813118123947242312371
346000
Capronia epimyces CBS 606.96104699989480119978
92000
Fonsecaea erecta12090112648269811166
208000
Phialophora americana1091910363556810355
28000
Rhinocladiella mackenziei CBS 650.9311382106037798610517
312000
Phaeomoniella chlamydospora69076484423106474
54000
Cyphellophora europaea CBS 10146611094101579378410073
255000
Cladophialophora carrionii11181100921089410088
85000

Chytridiomycota

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Gonapodya prolifera JEL478138279283454420807203
2862000
Piromyces finnis10959100928674279665
1541000
Neocallimastix californiae20200185131687202616487
8247000
Rhizoclosmatium globosum1698712432455542478185
5435000
Spizellomyces punctatus DAOM BR1178950718517653586827
586000
Anaeromyces robustus1282311460136386210598
2500000

Corticiales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Punctularia strigosozonata HHB-11173 SS5209717393582031536
401000

Cryptomycota

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Paramicrosporidium saccamoebae3766261511513622253
335000
Rozella allomycis CSF556350407822726503428
587000

Culicosporidae

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Edhazardia aedis USNM 414574190197722136061371
509000

Dacrymycetales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Dacryopinax primogenitus10240899612444398557
902000
Calocera cornea HHB127331315210991216160610385
1493000
Calocera viscosa TUFC127331235710680167738010300
1310000

Dothideomycetes

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Cercospora berteroae1190310782112121610566
294000
Zymoseptoria brevis105669866700529814
160000
Ramularia collo-cygni11502990715952179690
230000
Rachicladosporium sp. CCFEE 5018188921818970320417985
2729000
Hortaea werneckii EXF-2000156201519542524914946
6716000
Pseudocercospora fijiensis CIRAD86130471030827395710251
115000
Cryoendolithus antarcticus18781183184639518223
1521000
Coniosporium apollinis CBS 10021893088383925848299
145000
Acidomyces richmondensis BFW11177957316047998774
858000
Baudoinia panamericana UAMH 107621050882632245268237
61000
Elsinoe australis ASM301379v19223820410191238081
253000
Zymoseptoria tritici IPO3231093196921239639629
169000
Sphaerulina musiva SO220210156883013261088722
128000
Dothistroma septosporum NZE101240096402760659575
127000
Pseudocercospora musae1040284471955308417
87000

Dothideales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Aureobasidium melanogenum CBS 11037410584924513393668879
501000

Erysiphales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Erysiphe necator648462542301766078
712000
Erysiphe pulchra68596668191716597
883000
Blumeria hordei DH14 strain f. sp. hordei DH14711866045148165788
1099000

Eurotiales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Aspergillus fumigatus A11639929965027969644
52000
Aspergillus terreus NIH262410401981858399809
117000
Aspergillus niger ASM285v2138721056733054210525
213000
Aspergillus nidulans FGSC A4105349565969689497
262000
Aspergillus oryzae RIB40 strain RIB 4012074113287463011298
127000
Elaphomyces granulatus71716709462706639
414000
Paecilomyces variotii No. 588778459418128447
74000
Penicilliopsis zonata CBS 506.6598698883986448839
191000
Talaromyces islandicus99279507420549453
154000
Aspergillus fumigatus Af2931012410009115239986
98000
Talaromyces atroroseus95239135388189117
63000
Aspergillus clavatus NRRL 19121873039148726
28000
Talaromyces stipitatus ATCC 10500124571170375433911364
1354000
Rasamsonia emersonii CBS 393.64984383821461998283
218000
Aspergillus fischeri NRRL 18110389100743152410050
85000
Aspergillus flavus NRRL3357143041262716771012617
106000
Penicillium antarcticum115141026712472799988
659000

Geastrales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Sphaerobolus stellatus SS1425075218233252927812545
12864000

Georgefischeriales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Tilletiaria anomala UBC 951680853291479695260
103000

Gloeophyllales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Gloeophyllum trabeum ATCC 115391175510742101343710305
1239000
Neolentinus lepideus HHB14362 ss-11315511342181387110471
1724000

Glomerellales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Colletotrichum higginsianum strain IMI 3490631614113383275813213251
1056000
Colletotrichum orbiculare MAFF 240422133461182815182711801
100000
Verticillium dahliae VdLs.171053510190345510185
44000
Colletotrichum graminicola M1.001120201095210682510927
76000
Colletotrichum fructicola Nara gc5153811434910329414255
367000
Verticillium longisporum vl2.denovo.v12107218332274030818024
4527000
Verticillium dahliae JR2113911012112701910102
60000

Helotiales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Rutstroemia sp. NJR-2017a BBW10975101917849810093
446000
Mollisia scopiformis1856715882268513415748
444000
Hyaloscypha hepaticicola1678313376340731813058
581000
Glarea lozoyensis ATCC 208681308311156192722710929
333000
Amorphotheca resinae ATCC 22711964282971345528245
71000
Diplocarpon rosae137611341834317013248
5859000
Rhynchosporium agropyri1367310849282413810711
260000
Phialocephala subalpina2017317972220113517837
650000
Cadophora sp. DSE10492276219281348157318708
1497000
Drepanopeziza brunnea f. sp. 'multigermtubi' MB_m110027881412133998415
516000

Hymenochaetales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Fomitiporia mediterranea MF3/22533412121145267
183000
Schizopora paradoxa17088136393449330210337
4815000

Hypocreales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Drechmeria coniospora823673169201787138
296000
Fusarium fujikuroi strain IMI 5828914815142066092914177
105000
Fusarium vanettenii 77-13-4 strain MPVI 77-13-4157051487083510714763
504000
Moelleriella libera RCEF 249084617823638257798
71000
Neonectria ditissima12685118947915211842
169000
Tolypocladium ophioglossoides CBS 10023991588541617198522
125000
Stachybotrys chlorohalonatus IBT 4028510706101056012810077
98000
Ophiocordyceps australis OphauG279927224768347190
117000
Fusarium verticillioides 7600141661299911671412985
47000
Escovopsis weberi68706434436106424
13000
Hirsutella minnesotensis 3608939087186723158403
2199000
Tolypocladium paradoxum8913827763678270
58000
Ophiocordyceps camponoti-rufipedis76186653965516602
107000
Hapsidospora chrysogenum ATCC 115508901812078148116
63000
Fusarium oxysporum f. sp. lycopersici 42871769616498119864815850
2005000
Ustilaginoidea virens Assembly_for_version_1_of_the_Villosiclava_virens_genome8426702913971056924
146000
Metarhizium rileyi NOR_1.08764829147368285
56000
[Torrubiella] hemipterigena10773100976761659932
664000
Trichoderma asperellum CBS 433.97125561077417822410750
109000
Metarhizium acridum CQMa 10298499434415169418
125000
Trichoderma reesei QM6a9125873638958731
17000
Fusarium pseudograminearum CS30961244811928520411924
19000
Claviceps purpurea 20.1882382186054597759
1275000
Purpureocillium lilacinum ASM165320v11177397991974789721
320000
Beauveria bassiana strain ARSEF 8028100959353742539300
253000
Trichoderma atroviride IMI 2060401177110823948610817
40000
Niveomyces insectorum RCEF 26494968888608478841
204000
Stachybotrys chartarum IBT 4028811368106657034210623
130000
Tolypocladium capitatum7534711841647114
33000
Pochonia chlamydosporia 1701420412022218213711885
633000
Fusarium graminearum PH-11419413198996213196
23000
Fusarium culmorum CS7071 strain UK9912465118336323211801
94000
Trichoderma virens Gv29-812400115288721511513
175000

Jaapiales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Jaapia argillacea MUCL 3360416373139792394201411965
4012000

Magnaporthales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Gaeumannomyces tritici R3-111a-11445811167329145210715
639000
Pyricularia oryzae strain BR321434910715363441210303
719000
Magnaporthiopsis poae ATCC 644111120989332276408893
150000

Microascales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Scedosporium apiospermum83768029347298000
127000
Lomentospora prolificans85608343217128331
129000
Thielaviopsis punctulata529652663005266
59000
Ceratocystis platani562252313912085023
343000

Microbotryales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Microbotryum lychnidis-dioicae p1A1 Lamole736466537115226131
644000

Microsporidia

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Spraguea lophii 42_110249916598402561403
271000
Enterospora canceri216916325373131319
322000
Amphiamblys sp. WSBS200636422568107413241244
1236000
Enterocytozoon hepatopenaei253617857512741511
335000
Pseudoloma neurophilia3644228913556161673
712000
Enterocytozoon bieneusi H348363229317017052226
1510000
Hepatospora eriocheir ASM208787v1.03052195410988191135
711000
Nematocida displodere227812261052293933
257000

Mixiales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Mixia osmundae IAM 14324 Mosmundae_2.06726549512314005095
521000

Mortierellomycotina

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Podila verticillata NRRL 6337150813082001111197
194000
Lobosporangium transversale118181044313759499494
1804000
Linnemannia elongata AG-7714959123912568128111110
2880000

Mucoromycotina

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Mucor ambiguus11343104608835359925
861000
Bifiguratus adelaidae571948358841224713
433000
Syncephalastrum racemosum11121961015115019109
880000
Rhizopus microsporus Rmicro_CBS_344.29_Allpaths-LG19564184651099150316962
8239000
Hesseltinella vesiculosa11139984912909068943
1241000
Lichtheimia corymbifera JMRC:FSU:96821228211116116668210434
1101000
Rhizopus delemar RA 99-88017459152222237170913513
5748000
Choanephora cucurbitarum119771054214358079735
1280000
Lichtheimia ramosa11510112013094011161
407000
Absidia repens14915132641651105612208
3960000

Myxotrichaceae

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Oidiodendron maius Zn1670114694200720014494
964000

Nosematidae

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Vairimorpha apis BRL 01276420666986481418
696000
Vittaforma corneae ATCC 50505223816405982021438
224000

Onygenales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Coccidioides posadasii str. Silveira1022585811644568525
165000
Uncinocarpus reesii 170477607028732426986
60000
Microsporum canis CBS 1134808765802773828025
61000
Histoplasma ohiense (nom. inval.) strain G217B112218740248112117529
1346000
Blastomyces dermatitidis ER-39755863511208607775
952000
Ascosphaera apis ARSEF 7405644255678751235444
209000
Nannizzia gypsea CBS 11889389218036885138023
52000
Helicocarpus griseus UAMH5409102249448776869362
215000
Paracoccidioides brasiliensis Pb18839069231467256898
87000
Trichophyton equinum CBS 127.97867676321044357597
69000
Coccidioides immitis H538.41053884312107228409
193000
Polytolypa hystricis UAMH7299993488021132648738
149000
[Emmonsia] crescens ASM100828v1944483831061738310
156000

Ophiostomatales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Sporothrix brasiliensis 51109091867641548672
59000
Grosmannia clavigera kw14078312769162187683
83000
Sporothrix schenckii ATCC 582518674856810608568
12000
Ophiostoma piceae UAMH 1134688848241643278214
71000

Orbiliales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Orbilia oligospora ATCC 24927114791002714522429785
529000
Drechslerella stenobrocha 2485597524135645237
17000
Dactylellina haptotyla CBS 200.5010959988710721339754
452000

Ordosporidae

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Ordospora colligata OC418201429391131416
34000

Pezizales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Tuber borchii123451008522609759110
2236000
Tuber magnatum9431838010515357845
904000
Tuber melanosporum Mel2874966551945256526
103000

Pleistophoridae

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Vavraia culicis subsp. floridensis277323164571052211
191000
Trachipleistophora hominis321224088041962212
280000

Pleosporales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Phaeosphaeriaceae sp. SRC1lsM3a144251281316126512748
196000
Parastagonospora nodorum SN15123911037620152710349
71000
Periconia macrospinosa1873515496323961914877
1323000
Epicoccum nigrum120251070313225810645
150000
Bipolaris maydis C5133111232598614512180
653000
Bipolaris oryzae ATCC 445601200211128874611122
38000
Plenodomus lingam JN31246989763493228954
57000
Pyrenochaeta sp. DS3sAY3a1499012990200010612884
243000
Pyrenophora teres f. teres 0-1117991119160821710974
506000
Corynespora cassiicola Philippines1715813582357625313329
525000
Ascochyta rabiei105969731865229709
92000
Paraphaeosphaeria sporulosa147341211426204912065
150000
Clohesyomyces aquaticus1581112519329214012379
278000
Alternaria alternata Altal1134661207713893712040
103000
Pyrenophora tritici-repentis Pt-1C-BFP121691097211975010922
356000
Exserohilum turcica Et28A11698107159837110644
252000
Stemphylium lycopersici ASM119154v18997868531248681
34000

Polyporales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Trametes coccinea BRFM3101269210809188330610503
911000
Fomitopsis schrenkii1385112515133692711588
2257000
Trametes cinnabarina1023398114221689643
982000
Daedalea quercina L-15889121911027519163359940
919000
Postia placenta Mad-698-R9083836971421266243
3883000
Fibroporia radiculosa926284927704208072
1010000
Phanerochaete chrysosporium RP-781359411134246072110413
1602000
Hermanssonia centrifuga ASM191385v21368410539314510259514
2051000
Phlebiopsis gigantea 11061_1 CR5-611855998418713029682
941000
Dichomitus squalens LYAD-421 SS1719263078853475960
1148000
Ganoderma sinense ZZ0214-115478136011877115812443
3624000
Gelatoporia subvermispora B1212210393172910289365
2379000
Wolfiporia cocos MD-104 SS101221210506170610539453
2083000
Laetiporus sulphureus 93-5313740115762164145210124
2410000
Grifola frondosa1503911137390211539984
2187000

Pucciniales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Melampsora larici-populina 98AG311637213530284261527378
6655000
Puccinia sorghi21078166704408603910631
7624000
Puccinia graminis f. sp. tritici CRL 75-36-700-315800133362464106912267
3789000
Puccinia striiformis f. sp. tritici PST-13018019141343885191512219
4251000
Puccinia triticina 1-1 BBBD Race 114878132471631144411803
4069000
Puccinia coronata f. sp. avenae ASM287327v128270262152055857717638
15852000

Rhizophydiales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Batrachochytrium dendrobatidis JEL423142113295756
57000

Russulales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Stereum hirsutum FP-91666 SS1161212233891561067
259000
Heterobasidion irregulare TC 32-11326410755250916219134
2589000
Peniophora sp. CONT18940153213619417511146
6007000

Saccharomycetales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Zygosaccharomyces parabailii1008610031551369895
4958000
Naumovozyma castellii55925432160895343
222000
Eremothecium gossypii FDAG14774464712794638
63000
Eremothecium cymbalariae DBVPG#72154434432311104323
10000
Lachancea lanzarotensis505849896954984
55000
Lachancea dasiensis509650049254999
48000
Nakaseomyces glabratus CBS 13853114993318984895
196000
Vanderwaltozyma polyspora DSM 7029453285134194965038
274000
Zygosaccharomyces rouxii ASM2636v1499149266524924
91000
Kazachstania africana CBS 251753785187191535134
214000
Huiozyma naganishii CBS 879753215065256495016
184000
Henningerozyma blattae CBS 628453895033356424991
361000
Tetrapisispora phaffii CBS 441752535059194365023
146000
Torulaspora delbrueckii497248898384881
63000
Naumovozyma dairenensis CBS 42155485396152525344
204000
Saccharomyces cerevisiae S288C6600556410361225442
350000

Schizosaccharomycetales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Schizosaccharomyces octosporus yFS2864986490680344872
135000
Schizosaccharomyces japonicus yFS27548784521357574464
196000
Schizosaccharomyces cryophilus OY2651554985170514934
195000
Schizosaccharomyces pombe 972h-51454912233694843
192000

Sclerotiniaceae

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Sclerotinia sclerotiorum 1980 UF-7010175710130741076994
360000
Botrytis cinerea B05.10117071051711907410443
126000

Sebacinales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Serendipita vermifera MAFF 30583015234129302304213210798
4606000
Serendipita indica DSM 118271176610073169312568817
2181000

Sordariales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Neurospora crassa OR74A975886401118348606
88000
Sordaria macrospora k-hell98989051847598992
206000
Madurella mycetomatis107071016054715110009
1331000
Chaetomium globosum CBS 148.5111048949715511459352
643000

Sordariomycetidae

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Coniochaeta ligniaria NRRL 306161365810931272732710604
383000
Diaporthe ampelina107049992712279965
97000
Cytospora mali ASM81338v11074195481193239525
65000
Coniella lustricola113148650266488642
60000
Phaeoacremonium minimum UCRPA788348449385428407
88000

Sporidiobolales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Rhodotorula graminis WP1727564668091486318
399000
Rhodotorula toruloides ATCC 204091281725452721052440
126000

Taphrinomycotina

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Pneumocystis carinii B803646356878123556
99000
Pneumocystis jirovecii RU7376135711901593412
175000
Pneumocystis murina B1233623355370343519
57000
Protomyces lactucae-debilis6725528914365664723
550000
Neolecta irregularis DAH-35531424312881994044
308000

Tremellales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Kwoniella bestiolae CBS 101189133765514783897266
528000
Tremella mesenterica DSM 155814561011445210801
186000
Naematelia encephala796468751089696806
170000
Cryptococcus deneoformans JEC2166326300332746226
235000
Kockovaella imperatae73926400992716329
174000

Tubulinosematidae

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Anncaliia algerae PRA3393598234012588551485
825000

Ustilaginales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Ustilago hordei710966884213006388
497000
Pseudozyma flocculosa PF-144254038387943944
127000
Kalmanozyma brasiliensis GHG0015765562014505620
10000
Testicularia cyperi706957121357855627
158000
Pseudozyma hubeiensis SY62747261591313116148
25000
Sporisorium reilianum SRZ266736502171306472
71000
Mycosarcoma maydis strain 52167656459306226437
83000
Moesziomyces aphidis60115627384215606
36000

Verrucariales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Endocarpon pusillum Z070209238803612022067830
333000

Wallemiales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Wallemia ichthyophaga EXF-994486540178481053912
235000

Xylariales

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Rosellinia necatrix124441062018244410576
203000
Hypoxylon sp. CI-4A117011050511964010465
108000
Daldinia sp. EC1211161101959663510160
84000
Eutypa lata UCREL111685107469399110655
226000

Fungi

Species# Genes# Genes in a tree# Orphaned genes# Genes in a single-species tree# Genes in a multi-species treeCoverage# species-specific duplications# Split genes# short genes# Long genesGene QC
Candidozyma pseudohaemuli strain B1210851344917217974820
165000
Candidozyma auris strain B8441896874222872
10000
Jaminaea rosea6858575411042365518
209000
Pseudomassariella vexata1256510439212610910330
229000
Wickerhamiella sorbophila47414048693663982
173000
Spathaspora passalidarum NRRL Y-27907598355943891075487
312000
Sistotremastrum suecicum HHB10207 ss-31365112321133022512096
558000
Wickerhamomyces ciferrii670263653374395926
681000
Ogataea polymorpha5171504712405047
49000
Pestalotiopsis fici W106-11541314167124614614021
494000
Ascoidea rubescens DSM 19686785503617492584778
555000
Plicaturopsis crispa FD-325 SS-3271621026142891813
518000
Lodderomyces elongisporus NRRL YB-4239579953944051175277
256000
Pseudomicrostroma glucosiphilum668156989831475551
172000
Kuraishia capsulata CBS 199360295378651425336
235000
Candidozyma duobushaemuli strain B09383666655110655
4000
Acaromyces ingoldii8026700810182726736
373000
Komagataella phaffii GS115 ASM174695v15035492311254918
23000
Sistotremastrum niveocremeum HHB9708130691212194822311898
530000
Komagataella phaffii GS115504049786204978
9000
Clavispora lusitaniae ATCC 4272059365281655545227
140000
Leucosporidium creatinivorum9854840414507927612
1275000
Candida parapsilosis CDC31758635643220425601
323000
Suhomyces tanzawaensis NRRL Y-1732458845303581485255
120000
Hanseniaspora guilliermondii407030231047322991
128000
Candida tropicalis MYA-3404625459323221395793
418000
Tilletiopsis washingtonensis700556091396555554
56000
Candidozyma haemuli strain B11899733717162715
7000
Nadsonia fulvescens var. elongata DSM 695856484846802374809
320000
Pichia membranifaciens NRRL Y-202655424982560344948
103000
Meyerozyma guilliermondii ATCC 626059205590330575533
227000
Pachysolen tannophilus NRRL Y-246056645067597495018
183000
Scheffersomyces stipitis CBS 605458185646172815565
244000
Meira miltonrushii745264969564446052
557000
Debaryomyces hansenii CBS767627258724001345738
267000
Hyphopichia burtonii NRRL Y-193359955504491445460
139000
Ceraceosorus guamensis7822607617461955881
170000
Conidiobolus coronatus NRRL 28638105688259230926745585
3617000
Cutaneotrichosporon oleaginosum Triol18320645918611576302
480000
Millerozyma farinosa CBS 7064111751098618954510441
5485000
Babjeviella inositovora NRRL Y-126986398518612121075079
382000
Tortispora caseinolytica NRRL Y-1779646563882774743808
127000
Xylona heveae TC161820170321169616971
76000
Cyberlindnera jadinii50574587470874500
224000
Exidia glandulosa HHB1202926682219994683768014319
11033000
Candida albicans SC531461805817363405777
214000
Pichia kudriavzevii ASM76445v17107605010576795371
1115000
Wickerhamomyces anomalus NRRL Y-366-8642160463751185928
348000
Cyberlindnera fabianii ASM320585v156745383291235360
156000
Ogataea parapolymorpha DL-1532552339205233
15000
Sugiyamaella lignohabitans51354774361544720
237000
Brettanomyces bruxellensis AWRI1499486137691092233746
155000
Lipomyces starkeyi NRRL Y-115578182671914637245995
1182000
Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993583750947431314963
205000
Yarrowia lipolytica CLIB122644754769712585218
683000